Associate Scientist II, Computational Pathology
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South San Francisco, CA
- Corporate
 
- Full-time
 
AbbVie's mission is to discover and deliver innovative medicines and solutions that solve serious health issues today and address the medical challenges of tomorrow. We strive to have a remarkable impact on people's lives across several key therapeutic areas – immunology, oncology, neuroscience, and eye care – and products and services in our Allergan Aesthetics portfolio. For more information about AbbVie, please visit us at www.abbvie.com. Follow @abbvie on Twitter, Facebook, Instagram, YouTube and LinkedIn.
Key Responsibilities
- Hypothesize, analyze, visualize & interpret complex large multi-dimensional data.
 - Curate data to train & validate pathology machine learning models.
 - Architect, develop & maintain digital pathology infrastructure.
 - Mange, quality check, organize digital pathology data.
 - Optimize, automate & document workflows to improve efficiency.
 - Provide guidance & training to fellow colleagues.
 
Education & Experience
Must have a Bachelor's degree in Computer Science, Electrical Engineering, Biomedical Engineering, Industrial Engineering, Bioinformatics, Mathematics, Physics, or a related field, & 1 year programming in Python, Matlab &/or R.
Of experience required, must have 1 year in each of the following:
- visualizing large multi-dimensional data using the following 2 Python packages: seaborn & matplotlib;
 
- using either JPM or PRISM statistical software to perform statistical analysis on large datasets;
 
- using at least 1 of the following: Python (including scipy, scikit-learn), MATLAB, or R statistical programming language to perform statistical analysis on large datasets;
 
- building machine learning models including ensemble models,& kernel-based models;
 
(v) utilizing dimensionality reduction techniques including PCA, LDA, SVD & self-organizing maps; &
(vi) applying all of the above to pathology images & associated metadata.
Of experience required, must have 6 months of experience in:
- using 1 of the following digital pathology tools: Visiopharm, Halo, QuPath or Napari; &
 - utilizing AWS s3 buckets & automating using script integration.
 
Work experience may be gained concurrently.
Hybrid (onsite 3 days a week/ 2 days WFH)
Salary Range: $98,565.12 - $107,500.00 per year.
Apply online at https://careers.abbvie.com/en or send resume to Job.opportunity.abbvie@abbvie.com. Refer to Req ID: REF43648D.
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We offer a comprehensive package of benefits including paid time off (vacation, holidays, sick), medical/dental/vision insurance and 401(k) to eligible employees. This job is eligible to participate in our short-term and long-term incentive programs.
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